Actinobacteria is one of the largest bacterial phyla, comprised of Gram-positive bacteria. This phylum includes a wide range of species, with different morphological and physiological characteristics. Significant groups in the human colon include Actinomycetales and Bifidobacteriales. Actinomycetales were inversely associated with clinically significant depression in IBS patients, suggesting these bacteria may be depleted in depressed IBS patients. A strict vegetarian diet may increase the total count of Actinomyces spp. compared to following a Western diet.
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Acinetobacter junii, Actinobacteria, Actinomycetales, Adenovirus F40/41, Akkermansia muciniphila, Alistipes onderdonkii, Alistipes spp., Bacilli Class, Bacillus licheniformis, Bacteroides fragilis, Bacteroides pectinophilus, Bacteroides spp., Bacteroides spp. & Prevotella spp., Bacteroides stercoris, Bacteroides zoogleoformans, Bifidobacterium spp., Carbohydrates, Catenibacterium mitsuokai, Citrobacter farmeri / amalonaticus, Citrobacter freundii complex, Clostridia Class, Clostridium L2-50, Clostridium methylpentosum, Coprobacillus cateniformis, Dialister invisus, Dialister invisus & Megasphaera micronuciformis, Dorea spp., Enterobacter cloacae complex, Enterobacteriaceae, Escherichia spp., Eubacterium biforme, Eubacterium hallii, Eubacterium siraeum, Faecalibacterium prausnitzii, Firmicutes, Klebsiella pneumoniae, Klebsiella pneumoniae/variicola, Lachnospiraceae, Lactobacillus ruminis & Pediococcus acidilactici, Lactobacillus spp., Lactococcus garvieae, Mycoplasma hominis, Parabacteroides johnsonii, Parabacteroides spp., Phascolarctobacterium spp., Proteobacteria, RBC, Rothia mucilaginosa, Ruminococcus albus & R. bromii, Ruminococcus gnavus, Streptococcus agalactiae & Eubacterium rectale, Streptococcus parasanguinis, Streptococcus salivarius, Streptococcus salivarius ssp., Streptococcus salivarius ssp. thermophilus, Streptococcus salivarius ssp. thermophilus & S. sanguinis, Streptococcus spp., Veillonella spp., Yeast
