Histamine in Stool

Stool
check icon Optimal Result: 0 - 959 ng/g.

What is Histamine in Stool?

Histamine in stool refers to the measurement of histamine levels excreted in feces. Histamine is a naturally occurring compound involved in immune responses, digestion, and acting as a neurotransmitter. While it plays an important role in protecting the body, excess histamine—especially in the digestive system—can signal problems such as inflammation, food intolerances, or bacterial imbalance in the gut.

Testing histamine in stool helps evaluate whether the body is producing or accumulating too much histamine in the gastrointestinal (GI) tract. This biomarker is particularly useful in assessing individuals with unexplained GI symptoms, suspected food intolerances (especially to histamine-rich foods), inflammatory bowel diseases, or dysbiosis (gut microbiome imbalance).


Why Is Histamine Found in Stool?

Histamine in the GI tract can originate from several sources:

  • Mast cells: These immune cells release histamine in response to allergens or irritation.

  • Gut bacteria: Some intestinal microbes (e.g., Morganella, Klebsiella, Proteus, Lactobacillus reuteri) can produce histamine during fermentation.

  • Food: Aged, fermented, or processed foods often contain high levels of histamine.

  • Reduced breakdown: Histamine is normally broken down by enzymes like diamine oxidase (DAO) in the gut. If DAO activity is low, histamine accumulates.

Elevated fecal histamine suggests one or more of these sources may be contributing to gut inflammation or imbalance.

What does it mean if your Histamine in Stool result is too high?

Elevated levels of histamine in stool typically indicate that there is excess histamine activity in the gastrointestinal (GI) tract, which may be caused by:


1. Gut Inflammation

  • Conditions like IBS, IBD (Crohn’s disease, ulcerative colitis), or food-triggered gut irritation can activate mast cells in the gut lining, which release histamine as part of the immune response.


2. Histamine Intolerance

  • This occurs when the body has reduced ability to break down histamine, often due to low levels or poor activity of the diamine oxidase (DAO) enzyme in the intestines.

  • Leads to a buildup of histamine and symptoms after eating histamine-rich foods.


3. Gut Dysbiosis

  • Overgrowth of histamine-producing bacteria (e.g., Morganella, Klebsiella, Lactobacillus reuteri) in the intestines can increase fecal histamine levels.

  • Imbalanced microbiota can also worsen gut permeability and immune activation.


4. Food Sensitivities or Allergies

  • Reactions to specific foods can trigger immune cells to release histamine, particularly in individuals with food intolerances, allergies, or leaky gut.


5. Impaired Histamine Breakdown

  • Conditions that reduce DAO enzyme activity, such as chronic inflammation, alcohol use, certain medications (e.g., NSAIDs, antibiotics), or genetic factors, can lead to histamine buildup.


6. Small Intestinal Bacterial Overgrowth (SIBO)

  • In SIBO, bacteria that should be limited to the large intestine overgrow in the small intestine, where they may produce excess histamine or interfere with its breakdown.


Clinical Symptoms That May Accompany Elevated Histamine:

  • Bloating, abdominal cramps, diarrhea

  • Headaches, flushing, hives, skin rashes

  • Nausea after meals

  • Fatigue, irritability, brain fog

  • Sensitivity to histamine-rich foods (e.g., wine, aged cheese, fermented foods)


In summary, elevated histamine in stool is a red flag for gut dysfunction—especially related to inflammation, microbial imbalance, or impaired histamine clearance. It warrants further evaluation of gut health, diet, and immune responses.

All Your Lab Results.
One Simple Dashboard.

Laboratories

Bring All Your Lab Results Together — In One Place

We accept reports from any lab, so you can easily collect and organize all your health information in one secure spot.

lab corp logo
genova diagnostics logo
quest diagnostics logo
dutch test logo
doctors data logo
vibrant america logo
diagnostic solutions logo
zrt laboratory logo
the great plains laboratory logo
cyrex laboratories logo
spectracell logo

Pricing Table

decoration

Personal plans

$15/ month

Complete Plan

Access your lab reports, explanations, and tracking tools.

  • Import lab results from any provider
  • Track all results with visual tools
  • Customize your reference ranges
  • Export your full lab history anytime
  • Share results securely with anyone
  • Begin with first report entered
  • Cancel or upgrade anytime

$250/ once

Unlimited Account

Pay once, access everything—no monthly fees, no limits.

  • Import lab results from any provider
  • Track all results with visual tools
  • Customize your reference ranges
  • Export your full lab history anytime
  • Share results securely with anyone
  • Receive 10 reports entered for you
  • Skip the $15/month subscription — no recurring payments ever

$45/ month

Pro Monthly

Designed for professionals managing their clients' lab reports

  • Import lab results from any provider
  • Track lab results for multiple clients
  • Customize reference ranges per client
  • Export lab histories and reports
  • Begin with first report entered by us
  • Cancel or upgrade anytime

About membership

What's included in a Healthmatters membership

microscope icon Import Lab Results from Any Source

person icon See Your Health Timeline

book icon Understand What Your Results Mean

textbook icon

textbook icon Visualize Your Results

folder icon

folder icon

card icon Securely Share With Anyone You Trust

Let Your Lab Results Tell the Full Story

What Healthmatters Members Are Saying

5 stars rating

I have been using Healthmatters.io since 2021. I travel all over the world and use different doctors and health facilities. This site has allowed me to consolidate all my various test results over 14 years in one place. And every doctor that I show this to has been impressed. Because with  any health professional I talk to, I can pull up historical results in seconds. It is invaluable. Even going back to the same doctor, they usually do not have the historical results from their facility in a graph format. That has been very helpful.

Anthony

Unlimited Plan Member since 2021

5 stars rating

What fantastic service and great, easy-to-follow layouts! I love your website; it makes it so helpful to see patterns in my health data. It's truly a pleasure to use. I only wish the NHS was as organized and quick as Healthmatters.io. You've set a new standard for health tracking!

Karin

Advanced Plan Member since 2020

5 stars rating

As a PRO member and medical practitioner, Healthmatters.io has been an invaluable tool for tracking my clients' data. The layout is intuitive, making it easy to monitor trends and spot patterns over time. The ability to customize reports and charts helps me present information clearly to my clients, improving communication and outcomes. It's streamlined my workflow, saving me time and providing insights at a glance. Highly recommended for any practitioner looking for a comprehensive and user-friendly solution to track patient labs!

Paul

Healthmatters Pro Member since 2024

Use promo code to save 10% off any plan.

Frequently asked questions

Healthmatters is a personal health dashboard that helps you organize and understand your lab results. It collects and displays your medical test data from any lab in one secure, easy-to-use platform.

  • Individuals who want to track and understand their health over time.
  • Health professionals, such as doctors, nutritionists, and wellness coaches, need to manage and interpret lab data for their clients.

With a Healthmatters account, you can:

  • Upload lab reports from any lab
  • View your data in interactive graphs, tables, and timelines
  • Track trends and monitor changes over time
  • Customize your reference ranges
  • Export and share your full lab history
  • Access your results anytime, from any device

Professionals can also analyze client data more efficiently and save time managing lab reports.

Healthmatters.io personal account provides in-depth research on 4000+ biomarkers, including information and suggestions for test panels such as, but not limited to:

  • The GI Effects® Comprehensive Stool Profile,
  • GI-MAP,
  • The NutrEval FMV®,
  • The ION Profile,
  • Amino Acids Profile,
  • Dried Urine Test for Comprehensive Hormones (DUTCH),
  • Organic Acids Test,
  • Organix Comprehensive Profile,
  • Toxic Metals,
  • Complete Blood Count (CBC),
  • Metabolic panel,
  • Thyroid panel,
  • Lipid Panel,
  • Urinalysis,
  • And many, many more.

You can combine all test reports inside your Healthmatters account and keep them in one place. It gives you an excellent overview of all your health data. Once you retest, you can add new results and compare them.

If you are still determining whether Healthmatters support your lab results, the rule is that if you can test it, you can upload it to Healthmatters.

shield icon

We implement proven measures to keep your data safe.

At HealthMatters, we're committed to maintaining the security and confidentiality of your personal information. We've put industry-leading security standards in place to help protect against the loss, misuse, or alteration of the information under our control. We use procedural, physical, and electronic security methods designed to prevent unauthorized people from getting access to this information. Our internal code of conduct adds additional privacy protection. All data is backed up multiple times a day and encrypted using SSL certificates. See our Privacy Policy for more details.

gdpr compliance image hipaa compliance image